BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB017C12SP1|AL427145
(1004 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1805 1971 0.0
>3x_Contig1805
Length = 19369
Score = 1971 bits (993), Expect = 0.0
Identities = 1002/1005 (99%), Gaps = 1/1005 (0%)
Strand = Plus / Minus
Query: 1 atgtcatttttttcatactgcaaactttcctctgctgcaaccccactactaggtgtaaaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3737 atgtcatttttttcatactgcaaactttcctctgctgcaaccccactactaggtgtaaaa 3678
Query: 61 tgtgcatacgtggggctgccccaccactaaaaggatcaaaagaattttcgtttggtaatc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3677 tgtgcatacgtggggctgccccaccactaaaaggatcaaaagaattttcgtttggtaatc 3618
Query: 121 gacaattttaacgagttacttcattgcagtggaagctcgaagtaaatctgaaaccgagcc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3617 gacaattttaacgagttacttcattgcagtggaagctcgaagtaaatctgaaaccgagcc 3558
Query: 181 ggatgaaggaaaaggcatgatgtaactccttatttattacctgttttgttttgtttctca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3557 ggatgaaggaaaaggcatgatgtaactccttatttattacctgttttgttttgtttctca 3498
Query: 241 gtatatcagcttatgcagaacttcgacacggtgttttgcgaagaaattgacaaaggattt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3497 gtatatcagcttatgcagaacttcgacacggtgttttgcgaagaaattgacaaaggattt 3438
Query: 301 tctcttaaagttaaccagatcacaataagatcgaccctactgcgcaatcaaaatcagaga 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3437 tctcttaaagttaaccagatcacaataagatcgaccctactgcgcaatcaaaatcagaga 3378
Query: 361 ttctttgtgtacgcactggtctattggttaccagatgcgatgaaatgcttctttggagat 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3377 ttctttgtgtacgcactggtctattggttaccagatgcgatgaaatgcttctttggagat 3318
Query: 421 aagcttccagaacgaagattgtcagttaacttacatctgtaacatttccaacgcgtgttt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3317 aagcttccagaacgaagattgtcagttaacttacatctgtaacatttccaacgcgtgttt 3258
Query: 481 tcattgcatgtyatcggattcgttatcaatgcattcaaacatatgccacagtcaagtgtc 540
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3257 tcattgcatgttatcggattcgttatcaatgcattcaaacatatgccacagtcaagtgtc 3198
Query: 541 agcttctacaggtttgagagaacattgtgaacgcatggtcgtttgcaccacagtttatag 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3197 agcttctacaggtttgagagaacattgtgaacgcatggtcgtttgcaccacagtttatag 3138
Query: 601 aattgttcatgtctacgtgtgtataatgtcggaaggatttcctattggcctctgaaaacc 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3137 aattgttcatgtctacgtgtgtataatgtcggaaggatttcctattggcctctgaaaacc 3078
Query: 661 agtttcactttccgttgatttgtttctaaacgttttccagaaaagagacaaataaaggct 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3077 agtttcactttccgttgatttgtttctaaacgttttccagaaaagagacaaataaaggct 3018
Query: 721 gaattgcgatgcatgcctgttctggtatctgatagggatccataaaagctgtgataactt 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3017 gaattgcgatgcatgcctgttctggtatctgatagggatccataaaagctgtgataactt 2958
Query: 781 gtttcaaagcacatttgtaaagcaatttccaggctcaagacaaacggtccatcattcgaa 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2957 gtttcaaagcacatttgtaaagcaatttccaggctcaagacaaacggtccatcattcgaa 2898
Query: 841 cttcagctctatatagtttcatgggattgggaagagggtgtttctagtgaatagtttaag 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2897 cttcagctctatatagtttcatgggattgggaagagggtgtttctagtgaatagtttaag 2838
Query: 901 agagtacgaatctggaacagtaacatcaaaacggtaagctcgcctggaaatatactacag 960
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2837 agagtacgaatctggaacagtaacatcaaaacggtaagctcgcctggaaatatactacag 2778
Query: 961 gcggtttctttacgattcgtgaaa-tgtctacgaactcmgcgttt 1004
|||||||||||||||||||||||| ||||||||||||| ||||||
Sbjct: 2777 gcggtttctttacgattcgtgaaactgtctacgaactcagcgttt 2733
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6976
Number of Sequences: 1807
Number of extensions: 6976
Number of successful extensions: 37
Number of sequences better than 1.0e-20: 1
length of query: 1004
length of database: 10,358,551
effective HSP length: 16
effective length of query: 988
effective length of database: 10,329,639
effective search space: 10205683332
effective search space used: 10205683332
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)